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Subramaniam, Gopal, Ph.D.

Chercheur scientifique

Coordonnées :

960, av. Carling
Ottawa, (Ontario) K1A 0C6
Téléphone : 613-759-7619
Télécopieur : 613-759-1701
Courriel : rajagopal.subramaniam@agr.gc.ca

Domaines d'expertise :

  • pathologie de Fusarium graminearum
  • gels bidimensionnels
  • purification de protéines (chromatographie)
  • biologie moléculaire
  • Transfert de l'énergie de résonance bioluminescente
  • pathologie d'Arabidopsis
  • interactome des protéines
  • interactions entre les pathogènes des plantes

Publications de recherche

2019

  • Fernando, U., Chatur, S., Joshi, M., Thomas Bonner, C., Fan, T., Hubbard, K., Chabot, D., Rowland, O., Wang, L., Subramaniam, R., Rampitsch, C. (2019). Redox signalling from NADPH oxidase targets metabolic enzymes and developmental proteins in Fusarium graminearum, 20(1), 92-106. http://dx.doi.org/10.1111/mpp.12742

2018

  • Khan, M., Seto, D., Subramaniam, R., Desveaux, D. (2018). Oh, the places they'll go! A survey of phytopathogen effectors and their host targets, 93(4), 651-663. http://dx.doi.org/10.1111/tpj.13780
  • Khan, M., Youn, J.Y., Gingras, A.C., Subramaniam, R., Desveaux, D. (2018). In planta proximity dependent biotin identification (BioID), 8(1), http://dx.doi.org/10.1038/s41598-018-27500-3

2016

  • Khan, M., Subramaniam, R., et Desveaux, D. (2016). « Of Guards, Decoys, Baits and Traps: Pathogen Perception in Plants by Type III Effector Sensors. », Current Opinion in Microbiology, 29, p. 49-55. doi : 10.1016/j.mib.2015.10.006
  • Walkowiak, S., Rowland, O., Rodrigue, N., Subramaniam, R. (2016). Whole genome sequencing and comparative genomics of closely related Fusarium Head Blight fungi: Fusarium graminearum, F. meridionale and F. asiaticum, 17(1), http://dx.doi.org/10.1186/s12864-016-3371-1

2015

  • Carballo-Arce, A.F., Ta, C.A.K., Rocha, L.S.G., Liu, R., Harmsen, I., Mogg, C., Otárola-Rojas, M., Garcia, M., Sanchez-Vindas, P., Poveda, L., Subramaniam, R., Smith, M.L., Kaplan, M.A.C., Figueiredo, M.R., Durst, T., et Arnason, J.T. (2015). « Antimicrobial activities of Marcgraviaceae species and isolation of a naphthoquinone from Marcgravia nervosa (Marcgraviaceae). », Botany, 93(7), p. 413-424. doi : 10.1139/cjb-2015-0038
  • Subramaniam, R., Narayanan, S., Walkowiak, S., Wang, L., Joshi, M., Rocheleau, H., Ouellet, T., et Harris, L.J. (2015). « Leucine metabolism regulates TRI6 expression and affects deoxynivalenol production and virulence in Fusarium graminearum. », Molecular Microbiology, 98(4), p. 760-769. doi : 10.1111/mmi.13155
  • Walkowiak, S., Bonner, C., Wang, L., Blackwell, B.A., Rowland, O., et Subramaniam, R. (2015). « Intraspecies interaction of Fusarium graminearum contributes to reduced toxin production and virulence. », Molecular Plant-Microbe Interactions, 28(11), p. 1256-1267. doi : 10.1094/MPMI-06-15-0120-R

2014

  • Hurley, B., Subramaniam, R., Guttman, D.S., et Desveaux, D. (2014). « Proteomics of effector-triggered immunity (ETI) in plants. », Virulence, 5(7), p. 752-760. doi : 10.4161/viru.36329
  • Lumba, S., Toh, S., Handfield, L-F., Swan, M., Liu, R., Youn, J-Y., Cutler, S.R., Subramaniam, R., Provart, N.J., Moses, A., Desveaux, D., et McCourt, P. (2014). « A Mesoscale Abscisic Acid Hormone Interactome Reveals a Dynamic Signaling Landscape in Arabidopsis. », Developmental Cell, 29(3), p. 360-372. doi : 10.1016/j.devcel.2014.04.004
  • Lysøe, E., Harris, L.J., Walkowiak, S., Subramaniam, R., Divon, H.H., Riiser, E.S., Llorens, C., Gabaldón, T., Kistler, H.C., Jonkers, W., Kolseth, A.-K., Nielsen, K.F., Thrane, U., et Frandsen, R.J.N. (2014). « The genome of the generalist plant pathogen Fusarium avenaceum is enriched with genes involved in redox, signaling and secondary metabolism. », PLoS ONE, 9(11: e112703). doi : 10.1371/journal.pone.0112703
  • Murmu, J., Wilton, M., Allard, G.C., Pandeya, R.S., Desveaux, D., Singh, J., et Subramaniam, R. (2014). « Arabidopsis GOLDEN2-LIKE (GLK) transcription factors activate jasmonic (JA)-dependent disease susceptibility to the biotrophic pathogen Hyaloperonospera arabidopsidis, as well as JA-independent plant immunity against the necrotrophic pathogen Botrytis cinerea. », Molecular Plant Pathology, 15(2), p. 174-184. doi : 10.1111/mpp.12077
  • Ravensdale, M., Rocheleau, H.J., Wang, L., Nasmith, C.G., Ouellet, T., et Subramaniam, R. (2014). « Components of priming-induced resistance to fusarium head blight in wheat revealed by two distinct mutants of Fusarium graminearum. », Molecular Plant Pathology, 15(9), p. 948-956. doi : 10.1111/mpp.12145
  • Walkowiak, S. et Subramaniam, R. (2014). « A nitrogen responsive gene affects virulence in Fusarium graminearum. », Canadian Journal of Plant Pathology, 36(2), p. 224-234. doi : 10.1080/07060661.2014.905495
  • Wang, L., Mogg, C., Walkowiak, S., Joshi, M., et Subramaniam, R. (2014). « Characterization of NADPH Oxidase genes NoxA and NoxB in Fusarium graminearum », Canadian Journal of Plant Pathology, 36(1), p. 12-21. doi : 10.1080/07060661.2013.868370

2013

  • Harris, L.J., Ouellet, T., et Subramaniam, R. (2013). « Applying proteomics to investigate the interactions between pathogenic Fusarium species and their hosts. », dans Brown, D.W. and Proctor, R.H. (dir.) - Fusarium: Genomics, Molecular and Cellular Biology, Caister Academic Press, Chapitre 5.
  • Rampitsch, C., Day, J., Subramaniam, R., et Walkowiak, S. (2013). « Comparative secretome analysis of Fusarium graminearum and two of its non-pathogenic mutants upon deoxynivalenol induction in vitro. », Proteomics, 13(12-13), p. 1913-1921. doi : 10.1002/pmic.201200446

2012

  • Balcerzak, M., Harris, L.J., Subramaniam, R., et Ouellet, T. (2012). « The feruloyl esterase gene family of Fusarium graminearum is differentially regulated by aromatic compounds and hosts. », Fungal Biology, 116(4), p. 478-488. doi : 10.1016/j.funbio.2012.01.007
  • Rampitsch, C., Tinker, N.A., Subramaniam, R., Barkow-Oesterreicher, S., et Laczko, E. (2012). « Phosphoproteome profile of Fusarium graminearum grown in vitro under nonlimiting conditions. », Proteomics, 12(7), p. 1002-1005. doi : 10.1002/pmic.201100065

2011

  • Nasmith, C.G., Walkowiak, S., Wang, L., Leung, W.W.Y., Gong, Y., Johnston, A., Harris, L.J., Guttman, D.S., et Subramaniam, R. (2011). « Tri6 Is a Global Transcription Regulator in the Phytopathogen Fusarium graminearum. », PLoS Pathogens, 7(9, Article No. e1002266). doi : 10.1371/journal.ppat.1002266
  • Rampitsch, C., Leung, W.W.Y., Blackwell, B.A., et Subramaniam, R. (2011). « MAP kinase Mgv1: a potential shared control point of butenolide and deoxynivalenol biosynthesis in Fusarium graminearum. », Plant Breeding and Seed Science, 54, p. 81-88.
  • Schreiber, K.J., Nasmith, C.G., Allard, G.C., Singh, J., Subramaniam, R., et Desveaux, D. (2011). « Found in Translation: High-Throughput Chemical Screening in Arabidopsis thaliana Identifies Small Molecules That Reduce Fusarium Head Blight Disease in Wheat. », Molecular Plant-Microbe Interactions, 24(6), p. 640-648. doi : 10.1094/MPMI-09-10-0210

2010

  • Rampitsch, C., Subramaniam, R., Djuric-Ciganovic, S., et Bykova, N.V. (2010). « The phosphoproteome of Fusarium graminearum at the onset of nitrogen starvation. », Proteomics, 10(1), p. 124-140. doi : 10.1002/pmic.200800399
  • Wilton, M., Subramaniam, R., Elmore, J., Felsensteiner, C., Coaker, G., et Desveaux, D. (2010). « The type III effector HopF2Pto targets Arabidopsis RIN4 protein to promote Pseudomonas syringae virulence. », Proceedings of the National Academy of Sciences of the USA (PNAS), 107(5), p. 2349-2354. doi : 10.1073/pnas.0904739107

2009

  • Arsovski, A.A., Villota, M.M., Rowland, O., Subramaniam, R., et Western, T.L. (2009). « MUM ENHANCERS are important for seed coat mucilage production and mucilage secretory cell differentiation in Arabidopsis thaliana. », Journal of Experimental Botany, 60(9), p. 2601-2612. doi : 10.1093/jxb/erp102
  • Subramaniam, R., Nasmith, C.G., Harris, L.J., et Ouellet, T. (2009). « Insight into Fusarium-cereal pathogenesis. », dans Bouarab, K., Brisson, N. and Daayf, F. (dir.) - Molecular Plant-Microbe Interactions, CABI Publishing, Chapitre 13, p. 319-336.

Autres publications relatives à la science

2018

  • Balcerzak, M., Babic, V., Cui,X., Sollapura, V., Schernthaner, J., Subramaniam, G., Datla, R., and Ouellet, T. 2018. Progress in genotyping and phenotyping wheat plants with editing in genes associated with either resistance or susceptibility to FHB. Joint 9th Canadian Workshop on Fusarium Head Blight and 4th Canadian Wheat Symposium, Winnipeg, November 19-22, 2018
  • Eranthodi A, Subramaniam R, Ouellet T, Rampitsch C, Shostak K, González-Peña Fundora D, Schultz EA, Foroud NA. 2018. The role of three secreted cysteine-rich proteins of Fusarium graminearum fungal growth and host infection. 4th Lethbridge Research & Development Centre Graduate Symposium. Lethbridge AB, CANADA, November 15, 2018.
  • Eranthodi A, Subramaniam R, Rampitsch C, Ouellet T, González-Peña Fundora D, Schultz EA, Foroud NA. 2018. Characterization of three cysteine-rich proteins from the secretome of Fusarium graminearum. 9th Canadian Workshop of Fusarium Head Blight and the 4th Canadian Wheat Symposium Joint Meeting, Winnipeg MB, CANADA. Nov 19-22, 2018. (Oral Presentation)
  • González-Peña Fundora D, Eranthodi A, Goyal RK, Subramaniam R, Rampitsch C, Thakor N, Foroud NA. 2018. Effects of over-expressing the Mgv1 mitogen-activated protein kinase in Fusarium graminearum. 2018 Canadian Phytopathological Society Annual Meeting. Québec QC, CANADA, June 18-22, 2018. Published Abstract in the Canadian Journal of Plant Pathology. DOI:10.1080/07060661.2019.1519163
  • González-Peña Fundora D, Eranthodi A, Subramaniam R, Rampitsch C, Thakor N, Foroud NA. 2018. Overexpression of the Fusarium graminearum mitogen-activated protein kinase, Mgv1, does not affect vegetative growth or virulence. 4th Lethbridge Research & Development Centre Graduate Symposium. Lethbridge AB, CANADA, November 15, 2018. Award Winning Presentation.
  • González-Peña Fundora D, Subramaniam R, Rampitsch C, Eranthodi A, Thakor N, Foroud NA. 2018. MAPK overexpression in Fusarium graminearum—towards characterization of the Mgv1 signalling pathway. 14th European Fusarium Seminar, Tulln, AUSTRIA, April 8-12, 2018.
  • Plant Biology 2019 Abstract Book.
  • Sridhar P, Trofimova D, Bonner C, González-Peña Fundora D, Foroud NA, Subramaniam R, Allingham J, Loewen M. 2018. The role of the Fusarium graminearum ste2p receptor in the pathogenic infection of wheat. 9th Canadian Workshop of Fusarium Head Blight and the 4th Canadian Wheat Symposium Joint Meeting, Winnipeg MB, CANADA. Nov 19-22, 2018. (Oral Presentation)

2017

  • Eranthodi A, Subramaniam R, Rampitsch C, González-Peña Fundora D, Goyal RK, Schultz EA, Foroud NA. Characterization of three secreted cysteine-rich proteins from the secretome of Fusarium graminearum. 3rd Lethbridge Research & Development Centre Graduate Symposium. Lethbridge AB, CANADA, November 22, 2017. (Award Winning Presentation) (Oral Presentation)
  • Eranthodi A, Subramaniam R, Rampitsch C, González-Peña Fundora D, Shostak K, Goyal RK, Schultz EA, Foroud NA. The role of three small secreted cysteine-rich proteins of Fusarium graminearum on fungal growth and plant infection. National Fusarium Head Blight Forum. Milwaukee WI, UNITED STATES, December 3-5, 2017. Poster Presentation
  • Foroud NA, Subramaniam R, Goyal RK, Ryabova D, Pordel R, Eranthodi A, Chatterton S, Kovalchuk I. The effect of ethylene signalling on host-response in the Fusarium graminearum-wheat interaction. Canadian Wheat Alliance Science and Business Meeting. Saskatoon SK, CANADA, November 8-9, 2017. Poster Presentation.
  • González-Peña Fundora D, Eranthodi A, Goyal RK, Subramaniam R, Rampitsch C, Thakor N, Foroud NA. Over-expression of a Fusarium graminearum mitogen activated protein kinase, Mgv1. National Fusarium Head Blight Forum. Milwaukee WI, UNITED STATES, December 3-5, 2017. Poster Presentation
  • Gonzàlez-Peña Fundora D, Eranthodi A, Goyal RK, R. Subramaniam, Rampitsch C, Thakor N, Foroud NA. Generation and characterization of a Fusarium graminearum mutant overexpressing the MAPK, Mgv1. 2017 Joint Meeting of the Canadian Phytopathological Society and the Canadian Society of Agronomy. Winnipeg MB, Canada, June 18-22, 2017. Award Winning Presentation.

2016

  • Eranthodi, A., Subramaniam, R., Ouellet, T., Rampitsch, C., Foroud, N.A., et Schultz, E.A. (2016). « Mutant-based screening for pathogen-associated molecular patterns involved in Fusarium head blight disease resistance in wheat. », Prairie University Biology Symposium 2016, The University of Lethbridge, Lethbridge, AB, Canada, February 18-20, 2016. (Affiche)
  • Gonzalez-Pena Fundora, D., Thakor, N., Subramaniam, R., Rampitsch, C., et Foroud, N.A. (2016). « Towards the identification of the Mgv1 MAPK pathway in Fusarium graminearum. », Prairie University Biology Symposium 2016, The University of Lethbridge, Lethbridge, AB, Canada, February 18-20, 2016. (Affiche)

2015

  • Eranthodi, A., Subramaniam, R., Ouellet, T., Rampitsch, C., Schultz, E.A., et Foroud, N.A. (2015). « Fusarium graminearum mutant screening towards identification of pathogen-associated molecular patterns in the Fusarium head blight-wheat interaction. », 36th Annual Meeting of the Plant Pathology Society of Alberta, Lethbridge, AB, Canada, November 16-18, 2015, Oral Presentation.
  • Eranthodi, A., Subramaniam, R., Ouellet, T., Rampitsch, C., Schultz, E.A., et Foroud, N.A. (2015). « Towards the identification and characterization of pathogen-associated molecular patterns from the Fusarium graminearum secretome. », 1st Lethbridge Research Centre Graduate Student Symposium, Lethbridge, AB, Canada, November 26, 2015, Award Winning: 2nd Place for Oral Presentation.
  • Eranthodi, A., Subramaniam, R., Rampitsch, C., Ouellet, T., Schultz, E.A., et Foroud, N.A. (2015). « Generation of Fusarium graminearum mutants to screen candidate pathogen-associated molecular patterns. », National Fusarium Head Blight Forum, St. Louis, MO, USA, December 6-8, 2015. (Affiche)
  • Murmu, J., Jordan, M.C., Khan, M.A., Zhou, J., Wang, E., Allard, G.C., Babic, V., Datla, R.S.S., Subramaniam, R., et Singh, J. (2015). « Application of Golden2-like transcription factors (GLK1/GLK2) to improve photosynthesis and plant architecture in wheat. », 2nd Annual Science Meeting of the Canadian Wheat Association, Saskatoon, Canada, July 14-16, 2015, Oral Presentation. (Résumé)
  • Ouellet, T., Rocheleau, H., et Subramaniam, R. (2015). Gene expression in wheat heads treated with the mutant tri6Δ of Fusarium graminearum, which produces a priming-induced resistance to fusarium head blight. GEO accession #GSE69437, deposited in the Gene Expression Omnibus (GEO) of the public database NCBI.
  • Ravensdale, M., Wang, L., Rocheleau, H., Ouellet, T., et Subramaniam, R. (2015). Gene expression during priming-induced resistance to fusarium head blight in wheat as revealed by two distinct mutants of Fusarium graminearum. GEO accession #GSE55653, deposited in the Gene Expression Omnibus (GEO) of the public database NCBI.
  • Subramaniam, R., Wang, L., et Ouellet, T. (2015). Gene expression in wheat heads treated with the mutant noxABΔ of Fusarium graminearum, which produces a priming-induced resistance to fusarium head blight. GEO accession #GSE69490, deposited in the Gene Expression Omnibus (GEO) of the public database NCBI.

2013

  • Rampitsch, C., Day, J., Subramaniam, R., et Walkowiak, S. (2013). « Comparative secretome analysis of Fusarium graminearum and two of its non-pathogenic mutants under nitrogen-limitation in vitro. », FHB Satellite Meeting to 27th Fungal Genetics Conference, Asilomar, CA, USA, Oral presentation. (Résumé)
  • Rampitsch, C., Subramaniam, R., Joshi, M., et Fan, T. (2013). « Using redox-proteomics to identify targets of NADPH oxidase-generated reactive oxygen species in Fusarium graminearum. », 12th European Fusarium Seminar, Bordeaux, France, Oral presentation. (Résumé)

2012

  • Joshi, M., Subramaniam, R., et Rampitsch, C. (2012). « Identifying targets of NADPH oxidase-mediated redox signalling in Fusarium graminearum using proteomics approaches. », 11th European conference on fugal genetics (ECFG11), Philipps-Universität, Marburg, Germany, March 30-April 2, 2012. (Présentation)

2011

  • Allard, G.C., Subramaniam, R., Ouellet, T., Harris, L.J., et Singh, J. (2011). « Rapid screening of Arabidopsis mutants to identify transporter genes for resistance to Fusarium graminearum. », 7th Canadian Workshop on Fusarium Head Blight (CWFHB) / Colloque canadien sur la fusariose, Delta Winnipeg Hotel, Winnipeg, MB, Canada, November 27-30, 2011, p. 100.
  • Joshi, M., Subramaniam, R., et Rampitsch, C. (2011). « Identifying targets of NADPH oxidase‐mediated redox signalling in Fusarium graminearum using an LC‐MS approach. », 7th Canadian Workshop on Fusarium Head Blight (CWFHB) / Colloque canadien sur la fusariose, Delta Winnipeg Hotel, Winnipeg, MB, Canada, November 27-30, 2011, p. 97.
  • Mogg, C., Smith, M.L., et Subramaniam, R. (2011). « Chemical genomics: Discovery of novel fungicides and their targets in the phytopathogen Fusarium graminearum. », Canadian Society of Plant Physiologists Eastern Regional Meeting & Plant Development Workshop / Congrès de la Société Canadienne de Physiologie Végétale & Congrès de Développement Végétale (Congrès Régional de l’Est), Carleton University, Ottawa, ON, Canada, December 2-3, 2011, P9, p. 34. (Affiche)
  • Murmu, J., Singh, J., Wilton, M., Allard, G.C., Kirkham, C., Pandeya, R.S., Desveaux, D., et Subramaniam, R. (2011). « GLK transcription factors - an integral component of plant defense in Arabidopsis. », Canadian Society of Plant Physiologists Eastern Regional Meeting & Plant Development Workshop / Congrès de la Société Canadienne de Physiologie Végétale & Congrès de Développement Végétale (Congrès Régional de l’Est), Carleton University, Ottawa, ON, Canada, December 2-3, 2011, CS-2, p. 20.
  • Rampitsch, C., Subramaniam, R., Hoehn, B., Djuric-Ciganovic, S., et Fan, T. (2011). « Phosphoproteomics approach to understand signalling during the Fusarium graminearum-wheat interaction. », 12th International Symposium on Plant Protein Phosphorylation, Tübingen, Germany, September 14-16, 2011. (Affiche)
  • Robideau, G.P., Subramaniam, R., et Lévesque, C.A. (2011). « Inoculation of cucumber seedlings with purified Pythium flaggellar protein: Effect on seedling growth and response to subsequent attack by Pythium aphanidermatum zoospores. », 4th International Biofumigation & Biopesticides Symposium, Sheraton Cavalier Hotel, Saskatoon, SK, Canada, October 18-21, 2011, Book:15.
  • Subramaniam, R., Nasmith, C.G., Ouellet, T., Wang, L., et Rocheleau, H.J. (2011). « Novel strategies to combat fusarium head blight. », 7th Canadian Workshop on Fusarium Head Blight (CWFHB) / Colloque canadien sur la fusariose, Delta Winnipeg Hotel, Winnipeg, MB, Canada, November 27-30, 2011, p. 64.
  • Wilton, M., Subramaniam, R., Felsensteiner, C., et Desveaux, D. (2011). « Dissecting the plant-pathogen interface. », Canadian Society of Plant Physiologists Eastern Regional Meeting & Plant Development Workshop / Congrès de la Société Canadienne de Physiologie Végétale & Congrès de Développement Végétale (Congrès Régional de l’Est), Carleton University, Ottawa, ON, Canada, December 2-3, 2011, P29, p. 44. (Affiche)

2010

  • Rampitsch, C., Subramaniam, R., et Fan, T. (2010). « MAP Kinase Mgv1: A Potential Shared Control Point of Butenolide and Deoxynivalenol Biosynthesis in Fusarium Graminearum. », 11th European Fusarium Seminar: Fusarium - Mycotoxins, Taxonomy, Pathogenicity and Host Resistance, Plant Breeding and Acclimatization Institute (IHAR), Radzików, Poland, September 20-23, 2010, OP1.

2009

  • Rampitsch, C., Subramaniam, R., Bykova, N.V., et Djuric-Ciganovic, S. (2009). « Protein phosphorylation and DON synthesis: Candidate phosphopeptides from wild-type and map kinase (mgv1)-deficient Fusarium graminearum. », 6th Canadian Workshop on Fusarium Head Blight (CWFHB) / Colloque canadien sur la fusariose, Marriott Ottawa, Ottawa, ON, Canada, November 1-4, 2009, P68. (Résumé)
  • Rampitsch, C., Subramaniam, R., Djuric-Ciganovic, S., et Bykova, N.V. (2009). « The phosphoproteome of Fusarium graminearum at the onset of nitrogen starvation reveals phosphopeptides from proteins with a potential role in mycotoxin regulation. », 11th International Congress on Amino Acids, Peptides and Proteins, Vienna, Austria, August 3-7, 2009, Abstract. Amino Acids 37: 112-113. (Résumé)
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