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Agricultural research publications – 2016

Agriculture and Agri-Food Canada's research publications are evaluated by independent experts (peer reviewed or refereed) as part of the publication process to ensure they meet the highest standards of scientific and technical excellence. The publications in this list are:

Úrbez-Torres, J.R., Boulé, J., Haag, P., Hampson, C., O’Gorman, D.T. (2016). First report of root and crown rot caused by Fusarium oxysporum on sweet cherry (Prunus avium) in British Columbia, 100(4), 855.

Abalos, D., Brown, S.E., Vanderzaag, A.C., Gordon, R.J., Dunfield, K.E., Wagner-Riddle, C. (2016). Micrometeorological measurements over 3 years reveal differences in N<inf>2</inf>O emissions between annual and perennial crops, 22(3), 1244-1255.

Abalos, D., Jeffery, S., Drury, C.F., Wagner-Riddle, C. (2016). Improving fertilizer management in the U.S. and Canada for N<inf>2</inf>O mitigation: Understanding potential positive and negative side-effects on corn yields, 221 214-221.

Abalos, D., Smith, W.N., Grant, B.B., Drury, C.F., MacKell, S., Wagner-Riddle, C. (2016). Scenario analysis of fertilizer management practices for N<inf>2</inf>O mitigation from corn systems in Canada, 573 356-365.

Abdel-Aal, E.S.M., Hucl, P., Shipp, J., Rabalski, I. (2016). Compositional differences in anthocyanins from blue- and purple-grained spring wheat grown in four environments in central Saskatchewan, 93(1), 32-38.

Abdi, D., Cade-Menun, B.J., Ziadi, N., Tremblay, G.F., Parent, L.É. (2016). Visible near infrared reflectance spectroscopy to predict soil phosphorus pools in chernozems of Saskatchewan, Canada, 7(2), 93-101.

Abeywickrama, G., Debnath, S.C., Ambigaipalan, P., Shahidi, F. (2016). Phenolics of Selected Cranberry Genotypes (Vaccinium macrocarpon Ait.) and Their Antioxidant Efficacy, 64(49), 9342-9351.

Abram, P.K., Parent, J.P., Brodeur, J., Boivin, G. (2016). Size-induced phenotypic reaction norms in a parasitoid wasp: An examination of life-history and behavioural traits, 117(3), 620-632.

Acheampong, S., Zilahi-Balogh, G.M.G., Foottit, R.G., Judd, G.J.R. and DiMaria, T. 2016. Pacific Flatheaded Borer, Chrysobothris mali Horn (Coleoptera: Buprestidae), found attacking apple saplings in the Southern Interior of British Columbia. Journal of the Entomological Society of British Columbia, 113: 71-73.

Adams, M.J., Lefkowitz, E.J., King, A.M.Q., Harrach, B., Harrison, R.L., Knowles, N.J., Kropinski, A.M., Krupovic, M., Kuhn, J.H., Mushegian, A.R., Nibert, M., Sabanadzovic, S., Sanfaçon, H., Siddell, S.G., Simmonds, P., Varsani, A., Zerbini, F.M., Gorbalenya, A.E., Davison, A.J. (2016). Ratification vote on taxonomic proposals to the International Committee on Taxonomy of Viruses (2016), 161(10), 2921-2949.

Ahadiyat, A., Beaulieu, F. (2016). Two new mite species of the genus Zygoseius Berlese from Mexico (Acari, Mesostigmata), 2016(629), 11-49.

Ahmed, Z., Yang, H., Fu, Y.B. (2016). The associative changes in scutellum nuclear content and morphology with viability loss of naturally aged and accelerated aging wheat (Triticum aestivum) seeds, 7(September2016),

Ai, L., Guo, Q., Ding, H., Guo, B., Chen, W., Cui, S.W. (2016). Structure characterization of exopolysaccharides from Lactobacillus casei LC2W from skim milk, 56 134-143.

Akanno, E.C., Chen, L., Abo-Ismail, M.K., Crowley, J.J., Wang, Z., Li, C., Basarab, J.A., Macneil, M.D., Plastow, G. (2017). Genomic prediction of breed composition and heterosis effects in angus, charolais, and hereford crosses using 50k genotypes, 97(3), 431-438.

Al-Hatmi, A.M.S., Van Den Ende, A.H.G.G., Stielow, J.B., Van Diepeningen, A.D., Seifert, K.A., McCormick, W., Assabgui, R., Gräfenhan, T., De Hoog, G.S., Levesque, C.A. (2016). Evaluation of two novel barcodes for species recognition of opportunistic pathogens in Fusarium, 120(2), 231-245.

Alahakoon, U.I., Taheri, A., Nayidu, N.K., Epp, D., Yu, M., Parkin, I., Hegedus, D., Bonham-Smith, P., Gruber, M.Y. (2016). Hairy Canola (Brasssica napus) re-visited: Down-regulating TTG1 in an AtGL3-enhanced hairy leaf background improves growth, leaf trichome coverage, and metabolite gene expression diversity, 16(1),

Alam, M.Z., Lynch, D.H., Sharifi, M., Burton, D.L., and Hammermeister, A.M. (2016). "The effect of green manure and organic amendments on potato yield, nitrogen uptake and soil mineral nitrogen.", Biological Agriculture and Horticulture. doi : 10.1080/01448765.2015.1133319

Alam, S.B., Rochon, D. (2016). Cucumber necrosis virus recruits cellular heat shock protein 70 homologs at several stages of infection, 90(7), 3302-3317.

Alam, S.B., Rochon, D. (2017). Evidence that Hsc70 is associated with Cucumber Necrosis Virus particles and plays a role in particle disassembly, 91(2),

Alemu, A.W., Ominski, K.H., Bittman, S., MacDonald, D., and Amiro, B.D. (2016 in press). "A typological characterization of Canadian beef cattle farms based on a producer survey.", Canadian Journal of Animal Science.

Amarakoon, I.D., Sura, S., Zvomuya, F., Cessna, A.J., Larney, F.J., and McAllister, T.A. 2016. Dissipation of antimicrobials in a seasonally-frozen soil following beef cattle manure application. J. Environ. Qual. 45: 1644–1651.

Amarakoon, I.D., Zvomuya, F., Sura, S., Larney, F.J., Cessna. A.J., Xu, S. and McAllister, T.A. 2016. Dissipation of antimicrobials in feedlot manure compost after oral administration versus fortification after excretion. J. Environ. Qual. 45: 503–510.

Andersen, J.C., Bourchier, R.S., Grevstad, F., Van Driesche, R.G., and Mills, N.J. (2016). "Development and verification of SNP arrays to monitor hybridization between two host-associated strains of knotweed psyllid, Aphalara itadori.", Biological Control, 93, pp. 49-55. doi : 10.1016/j.biocontrol.2015.11.007

Andretta, I., Pomar, C., Rivest, J., Pomar, J., Radünz, J. (2016). Precision feeding can significantly reduce lysine intake and nitrogen excretion without compromising the performance of growing pigs, 10(7), 1137-1147.

Arango-Sabogal et al. 2016. Detection of Mycobacterium avium subspecies paratuberculosis in tie-stall dairy herds using a standardized environmental sampling technique and targeted pooled samples. Can J Vet Res 80(3):175-182.

Araujo, G.T., Amundsen, E., Aboukhaddour, R., Gaudet, D.A., Selinger, B.L., Laroche, A. 2016. Dose-response relationships between stripe rust pathogen and susceptible wheat. 37th Annual Meeting of the Plant Pathology Society of Alberta, Edmonton, AB, Nov 7-9, 2016. O, pp16.

Araujo, G.T., Amundsen, E., Gaudet, D., Selinger, B.L., Laroche, A. 2016. Incidence of important fungal wheat pathogens in western Canada. 50th Annual Prairie University Biology Symposium, February 18-20, 20116, University of Lethbridge, Lethbridge, AB. P1G.

Ariel, O. Ibeagha-Awemu, N. Gévry, and N. Bissonnette. Johnes disease bovine monocyte-derived macrophages are insensitive to ex vivo infection by Mycobacterium avium ssp. paratuberculosis. 2016 13th International Colloquium on Paratuberculosis, Nantes, France, June 19-24th.

Attram, J., Acharya, S.N., Woods, S.A., Smith, E., Thomas, J.E. (2016). Yield and net return from alfalfa cultivars under irrigation in Southern Alberta, 96(2), 165-175.

Austin, R.S., Hiu, S., Waese, J., Ierullo, M., Pasha, A., Wang, T.T., Fan, J., Foong, C., Breit, R., Desveaux, D., Moses, A., Provart, N.J. (2016). New BAR tools for mining expression data and exploring Cis-elements in Arabidopsis thaliana, 88(3), 490-504.

Ayala-Bribiesca, E., Lussier, M., Chabot, D., Turgeon, S.L., Britten, M. (2016). Effect of calcium enrichment of Cheddar cheese on its structure, in vitro digestion and lipid bioaccessibility, 53 1-9.

Bélanger, G., Tremblay, G.F., Bertrand, A., Mongrain, D., Parent, G., Savoie, P., Massé, D., Gilbert, Y., Babineau, D. (2016). Reed canarygrass crop biomass and silage as affected by harvest date and nitrogen fertilization, 96(3), 413-422.

Bae, J., Benoit, D.L., Watson, A.K. (2016). Effect of heavy metals on seed germination and seedling growth of common ragweed and roadside ground cover legumes, 213 112-118.

Bahadoor, A., Schneiderman, D., Gemmill, L., Bosnich, W., Blackwell, B., Melanson, J.E., McRae, G., Harris, L.J. (2016). Hydroxylation of Longiborneol by a Clm2-Encoded CYP450 Monooxygenase to Produce Culmorin in Fusarium graminearum, 79(1), 81-88.

Bai, M., Griffith, D.W.T., Phillips, F.A., Naylor, T., Muir, S.K., McGinn, S.M., Chen, D. (2016). Correlations of methane and carbon dioxide concentrations from feedlot cattle as a predictor of methane emissions, 56(1), 108-115.

Bainard, L.D., Hamel, C., Gan, Y. (2016). Edaphic properties override the influence of crops on the composition of the soil bacterial community in a semiarid agroecosystem, 105 160-168.

Bakkeren, G., Joly, D.L., and Duplessis, S. (2016). "Editorial: Genomics research on non-model plant pathogens: delivering novel insights into rust fungus biology.", Frontiers in Plant Science. doi : 10.3389/fpls.2016.00216

Balamurugan, S., Ahmed, R., Chibeu, A., Gao, A., Koutchma, T., Strange, P. (2016). Effect of salt types and concentrations on the high-pressure inactivation of Listeria monocytogenes in ground chicken, 218 51-56.

Baldé, H., VanderZaag, A.C., Burtt, S., Evans, L., Wagner-Riddle, C., Desjardins, R.L., MacDonald, J.D. (2016). Measured versus modeled methane emissions from separated liquid dairy manure show large model underestimates, 230 261-270.

Baldé, H., VanderZaag, A.C., Burtt, S.D., Gordon, R.J., and Desjardins, R.L. (2016 accepted). "Does fall removal of the dairy manure sludge in a storage tank reduce subsequent methane emissions?", Journal of Environmental Quality.

Baldé, H., VanderZaag, A.C., Burtt, S.D., Wagner-Riddle, C., Crolla, A., Desjardins, R.L., MacDonald, D.J. (2016). Methane emissions from digestate at an agricultural biogas plant, 216 914-922.

Baldizzone, G., Landry, J.F. (2016). Coleophora ericarnella Baldizzone, a new species of the C. pyrrhulipennella group (Lepidoptera: Coleophoridae) from the South-Eastern Alps, 4111(2), 177-186.

Ban, Z., L. Fan*, W. Kalt, M. Vinqvist-Tymchuk, T. Hughes, C. Doucette and J. Guan. 2016. Antimicrobial Effect of Haskapberry Juice and Extracts on Listeria innocua and E. coli. Poster presentation at the United Fresh 2016 and S-294. June 10-14th, Chicago, USA.

Ben Abdallah, S., Aung, B., Amyot, L., Lalin, I., Lachâal, M., Karray-Bouraoui, N., Hannoufa, A. (2016). Salt stress (NaCl) affects plant growth and branch pathways of carotenoid and flavonoid biosyntheses in Solanum nigrum, 38(3), 1-13.

Benaragama, D., Shirtliffe, S.J., Gossen, B.D., Brandt, S.A., Lemke, R., Johnson, E.N., Zentner, R.P., Olfert, O., Leeson, J., Moulin, A., Stevenson, C. (2016). Long-term weed dynamics and crop yields under diverse crop rotations in organic and conventional cropping systems in the Canadian prairies, 196 357-367.

Beres, B.L., Turkington, T.K., Kutcher, H.R., Irvine, B., Johnson, E.N., O’Donovan, J.T., Harker, K.N., Holzapfel, C.B., Mohr, R., Peng, G., Spaner, D.M. (2016). Winter wheat cropping system response to seed treatments, seed size, and sowing density, 108(3), 1101-1111.

Bertrand, A., Bipfubusa, M., Castonguay, Y., Rocher, S., Szopinska-Morawska, A., Papadopoulos, Y. et Renaut, J. 2016. A proteome analysis of freezing tolerance in red clover (Trifolium pratense L.). BMC Plant Biology.

Bertrand, A., Bipfubusa, M., Dhont, C., Chalifour, F.P., Drouin, P., Beauchamp, C.J. (2016). Rhizobial strains exert a major effect on the amino acid composition of alfalfa nodules under NaCl stress, 108 344-352.

Betts, A.K., Desjardins, R.L., and Worth, D.E. (2016). "The Impact of Clouds, Land use and Snow Cover on Climate in the Canadian Prairies.", Advances in Science and Research, 13, pp. 37-42. doi : 10.5194/asr-13-37-2016

Bhagwat, B., Chi, M., Han, D., Tang, H., Tang, G., and Xiang, Y. (2016). "Design, Construction, and Validation of Artificial MicroRNA Vectors Using Agrobacterium-Mediated Transient Expression System.", Methods in Molecular Biology (Clifton, N.J.), 1405, pp. 149-162. doi : 10.1007/978-1-4939-3393-8_14

Bhagwat, B., Dickison, V., Ding, X., Walker, M., Bernardy, M., Bouthillier, M., Creelman, A., DeYoung, R., Li, Y., Nie, X., Wang, A., Xiang, Y., Sanfaçon, H. (2016). Genome sequence analysis of five Canadian isolates of strawberry mottle virus reveals extensive intra-species diversity and a longer RNA2 with increased coding capacity compared to a previously characterized European isolate, 161(6), 1657-1663.

Bhagwat, B., Dickison, V., Su, L., Bernardy, M., Wiersma, P.A., Nie, X., Xiang, Y. (2016). Molecular Characterization of Divergent Strawberry Mild Yellow Edge Virus Isolates from Eastern Canada, 164(9), 691-696.

Bian, S., Li, J., Tian, G., Cui, Y., Hou, Y., Qiu, W. (2016). Combinatorial regulation of CLF and SDG8 during Arabidopsis shoot branching, 38(7),

Bing, D.J., Beauchesne, D., McLaren, D., Vera, C. (2016). AAC Radius field pea, 97(1), 196-198.

Bipfubusa, M., Rocher, S., Bertrand, A., Castonguay, Y., Renaut, J. (2016). Dataset of protein changes induced by cold acclimation in red clover (Trifolium pratense L.) populations recurrently selected for improved freezing tolerance, 8 570-574.

Biswas, D.K., Ma, B.L. (2016). Effect of nitrogen rate and fertilizer nitrogen source on physiology, yield, grain quality, and nitrogen use efficiency in corn, 96(3), 392-403.

Bittman, S., Sheppard, S.C., Poon, D., Hunt, D.E. (2017). Phosphorus flows in a peri-urban region with intensive food production: A case study, 187 286-297.

Blackman, C.K., Cappuccino, N., Mason, P.G. (2016). First Record of Lilioceris lilii (Scopoli) (Coleoptera: Chrysomelidae) on Lilium michiganense Farwell and Confirmation of Its Association with Streptopus lanceolatus (Aiton) Reveal (Liliaceae), 70(3), 482-484.

Blatt, S and Pruski, K. 2016. Annual Report for NC-140 Committee Meeting. Penn State University, Pennsylvania, USA, November.

Blatt, S.E., Bishop, C., Sweeney, J. (2017). Incidence of Monochamus (Coleoptera: Cerambycidae) species in Nova Scotia, Canada Christmas tree plantations and comparison of panel traps and lures from North America and Europe, 149(2), 191-203.

Boivin-Piché, J., Vuillemard, J.C., St-Gelais, D. (2016). Technical note: Vitamin D-fortified Cheddar type cheese produced from concentrated milk, 99(6), 4140-4145.

Bokore, F.E., Knox, R.E., Cuthbert, R.D., Ruan, Y., DePauw, R.M. (2016). Effects of media supplements on doubled haploid production in durum wheat, 97(1), 65-71.

Borrell, A.N., Shi, Y., Gan, Y., Bainard, L.D., Germida, J.J., Hamel, C. (2017). Fungal diversity associated with pulses and its influence on the subsequent wheat crop in the Canadian prairies, 414(1-2), 13-31.

Bosak, V., VanderZaag, A., Crolla, A., Kinsley, C., Gordon, R. (2016). Performance of a constructed wetland and pretreatment system receiving potato farm wash water, 8(5),

Bosak, V., Vanderzaag, A., Crolla, A., Kinsley, C., Gordon, R. (2016). Integrated water resources management: A case study of on-farm water use for potato processing, 11(1), 66-74.

Bosak, V.K., Vanderzaag, A.C., Crolla, A., Kinsley, C., Chabot, D., Miller, S.S., Gordon, R.J. (2016). Treatment of potato farm wastewater with sand filtration, 37(13), 1597-1604.

Bowness, R., Gossen, B.D., Chang, K.F., Goswani, R., Willenborg, C.J., Holtz, M., Strelkov, S.E. (2016). Sensitivity of mycosphaerella pinodes to pyraclostrobin fungicide, 100(1), 192-199.

Brajon, S., Laforest, J.P., Schmitt, O., Devillers, N. (2016). A preliminary study of the effects of individual response to challenge tests and stress induced by humans on learning performance of weaned piglets (Sus scrofa), 129 27-36.

Brito, A.F., Tremblay, G.F., Bertrand, A., Castonguay, Y., Bélanger, G., Michaud, R., Lafrenière, C., Martineau, R., Berthiaume, R. (2016). Performance and nitrogen use efficiency in mid-lactation dairy cows fed timothy cut in the afternoon or morning, 99(7), 5445-5460.

Brooks, S.E., Cumming, J.M. (2016). Neothalassius, a new genus of Parathalassiinae (Diptera: Dolichopodidae from the Pacific coast of South America, 4066(3), 311-322.

Brosnan, J.T., Vargas, J.J., Breeden, G.K., Grier, L., Aponte, R.A., Tresch, S., Laforest, M. (2016). A new amino acid substitution (Ala-205-Phe) in acetolactate synthase (ALS) confers broad spectrum resistance to ALS-inhibiting herbicides, 243(1), 149-159.

Brunke, A.J. (2016). First detection of the adventive large rove beetle Ocypus nitens (Schrank) in Canada and an update of its Nearctic distribution using data generated by the public, 4(1),

Buhrow, L.M., Cram, D., Tulpan, D., Foroud, N.A., Loewen, M.C. (2016). Exogenous abscisic acid and gibberellic acid elicit opposing effects on Fusarium graminearum infection in wheat, 106(9), 986-996.

Burgart, C., Hillier, N.K., Blatt, S. (2016). Apple cultivar preferences by Hoplocampa testudinea (Hymenoptera: Tenthredinidae) in the Annapolis Valley of Nova Scotia, Canada, 148(6), 724-735.

Burrell, Kenneth G.D., Skevington, Jeffrey H., Kelso, Scott, Burrell, Mike V.A., Leclair, Dayna L. and Mackenzie, Stuart A. (2016). A previously undocumented hybrid New World warbler (Setophaga pensylvanica x S. magnolia) captured at Long Point, Ontario. The Wilson Journal of Ornithology. 128(3): 624–628.

Bykova NV, Igamberdiev AU (2016) Redox state in plant mitochondria and its role in stress tolerance. In: Redox State as a Central Regulator of Plant-Cell Stress Responses. D.K. Gupta, J. M. Palma, F. J. Corpas (Editors), Springer International Publishing AG Switzerland. DOI 10.1007/978-3-319-44081-1_5; pp 93-115.

Cai, Y., Shao, L., Li, X., Liu, G., Chen, S. (2016). Gibberellin stimulates regrowth after defoliation of sheepgrass (Leymus chinensis) by regulating expression of fructan-related genes, 129(5), 935-944.

Cambouris, A.N., St. Luce, M., Zebarth, B.J., Ziadi, N., Grant, C.A., Perron, I. (2016). Potato response to nitrogen sources and rates in an irrigated sandy soil, 108(1), 391-401.

Camilleri-Rumbau, M.S., Masse, L., Dubreuil, J., Mondor, M., Christensen, K.V., Norddahl, B. (2016). Fouling of a spiral-wound reverse osmosis membrane processing swine wastewater: Effect of cleaning procedure on fouling resistance, 37(13), 1704-1715.

Campbell, I.C., Felfel, A., Shakeri, M., and Verreault, P. (2016). "Driving Forces.", in Clearwater, R.L., Martin, T. and Hoppe, T. (eds.) - Environmental sustainability of Canadian agriculture: Agri-environmental indicator report series -- Report #4, Agriculture and Agri-Food Canada, Chapter 3, pp. 17-27.

Canadian Journal of Diabetes. 2016;40(4):355-63.

Cao, W., Fedak, G., Voldeng, H., Somers, D., Xue, A.G., Fregeau-Reid, J., McCartney, C., Humphreys, G. (2016). Hard white spring wheat line WS175 with a high level of resistance to Fusarium head blight, 96(6), 1060-1064.

Carreras, R., Arroyo, L., Mainau, E., Peña, R., Bassols, A., Dalmau, A., Faucitano, L., Manteca, X., Velarde, A. (2016). Effect of gender and halothane genotype on cognitive bias and its relationship with fear in pigs, 177 12-18.

Castagnino, D.S., Kammes, K.L., Allen, M.S., Gervais, R., Chouinard, P.Y., Girard, C.L. (2016). Particle length of silages affects apparent ruminal synthesis of B vitamins in lactating dairy cows, 99(8), 6229-6236.

Castagnino, D.S., Seck, M., Beaudet, V., Kammes, K.L., Voelker Linton, J.A., Allen, M.S., Gervais, R., Chouinard, P.Y., and Girard, C.L. (2016). "Effects of forage family on apparent ruminal synthesis of B vitamins in lactating dairy cows.", Journal of Dairy Science (JDS). doi : 10.3168/jds.2015-10319

Catton, H.A. and Michener, G.R. 2016. Cohort effects and proximal versus distal metrics for lifetime reproductive success in Richardson's ground squirrels

Celli, G.B., Kalt, W., and Brooks, M.S.-L. (2016). "Gastroretentive systems – a proposed strategy to modulate anthocyanin release and absorption for the management of diabetes.", Drug Delivery, pp. 1-10. doi : 10.3109/10717544.2016.1143058

Cerkowniak, D.D., McConkey, B.G., Smith, W.N., and Bentham, M.J. (2016). "Soil Organic Matter.", in Clearwater, R.L., Martin, T. and Hoppe, T. (eds.) - Environmental sustainability of Canadian agriculture: Agri-environmental indicator report series -- Report #4, Agriculture and Agri-Food Canada, Chapter 9, pp. 90-100.

Cervantes, M.P., Palomino, J.M., Anzar, M., Mapletoft, R.J., Adams, G.P. (2016). In vivo and in vitro maturation of oocytes collected from superstimulated wood bison (Bison bison athabascae) during the anovulatory and ovulatory seasons, 173 87-96.

Cervantes, M.P., Palomino, J.M., Anzar, M., Mapletoft, R.J., Mastromonaco, G.F., Adams, G.P. (2017). In vitro embryo production in wood bison (Bison bison athabascae) using in vivo matured cumulus-oocyte complexes, 89 122-130.

Chai, L., Kröbel, R., MacDonald, D., Bittman, S., Beauchemin, K.A., Janzen, H.H., McGinn, S.M., Vanderzaag, A. (2016). An ecoregion-specific ammonia emissions inventory of Ontario dairy farming: Mitigation potential of diet and manure management practices, 126 1-14.

Chai, Q., Gan, Y.T., Zhao, C., Xu, H.-L., Waskom, R.M., Niu, Y., and Siddique, K.H.M. (2016). "Regulated deficit irrigation for crop production under drought stress. A review.", Agronomy for Sustainable Development , 36(1: Article number 3), pp. 1-21. doi : 10.1007/s13593-015-0338-6

Champagne, C., Rowlandson, T.L., Berg, A.A., Burns, T., L'Heureux, J., Tetlock, E., Adams, J.R., McNairn, H., Toth, B.M., and Itenfisu, D. (2016). "Satellite Surface Soil Moisture from SMOS and Aquarius: Assessment for Applications in Agricultural Landscapes.", International Journal of Applied Earth Observation and Geoinformation, 45(Part B), pp. 143-154. doi : 10.1016/j.jag.2015.09.004

Champagne, C.P., Raymond, Y., Guertin, N., Martoni, C.J., Jones, M.L. (2016). Growth of Lactobacillus reuteri NCIMB 30242 during yogurt fermentation and bile salt hydrolysis activity in the product, 96(2), 173-184.

Chan, S.K., Bindlish, R., O'Neill, P.E., Njoku, E., Jackson, T., Colliander, A., Chen, F., Burgin, M., Dunbar, S., Piepmeier, J., Yueh, S., Entekhabi, D., Cosh, M.H., Caldwell, T., Walker, J., Wu, X., Berg, A., Rowlandson, T., Pacheco, A., McNairn, H., Thibeault, M., Martinez-Fernandez, J., Gonzalez-Zamora, A., Seyfried, M., Bosch, D., Starks, P., Goodrich, D., Prueger, J., Palecki, M., Small, E.E., Zreda, M., Calvet, J.C., Crow, W.T., Kerr, Y. (2016). Assessment of the SMAP Passive Soil Moisture Product, 54(8), 4994-5007.

Chang Liu . Herb Cutforth . Qiang Chai . Yantai Gan, Farming tactics to reduce the carbon footprint of crop cultivation in semiarid areas. A review. Agron. Sustain. Dev. (2016) 36:69 DOI 10.1007/s13593-016-0404-8

Chatterton, S., Balasubramanian, P.M., Erickson, R.S., Hou, A., McLaren, D.L., Henriquez, M.A., Conner, R.L. (2016). Identification of bacterial pathogens and races of Pseudomonas syringae pv. Phaseolicola from dry bean fields in Western Canada, 38(1), 41-54.

Chen, H., Arsovski, A.A., Yu, K., Wang, A. (2016). Genome-wide investigation using sRNA-seq, degradome-seq and transcriptome-seq reveals regulatory networks of MicroRNAs and their target genes in soybean during soybean mosaic virus infection, 11(3),

Chen, J., Wang, Q., Liu, C-M., and Gong, J. (2016). "Issues deserve attention in encapsulating probiotics: critical review of existing literatures.", Critical Reviews in Food Science and Nutrition. doi : 10.1080/10408398.2014.977991

Chen, S., L. Fan*, J. Song, H. Zhang, C. Doucette, T. Hughes and L. Campbell. 2016. Quantitative analysis of protein profile of ascospores of Neosartorya pseudofischeri subjected to heat treatment. Poster presentation at the ISEKI Food Conference. July 5-8th. Vienna, Austria.

Chen, W., Turkington, T.K., Lévesque, C.A., Bamforth, J.M., Patrick, S.K., Lewis, C.T., Chapados, J.T., Gaba, D., Tittlemier, S.A., MacLeod, A., Gräfenhan, T. (2016). Geography and agronomical practices drive diversification of the epiphytic mycoflora associated with barley and its malt end product in western Canada, 226 43-55.

Chen, X., Su, Y., Liao, J., Shang, J., Dong, T., Wang, C., Liu, W., Zhou, G., Liu, L. (2016). Detecting significant decreasing trends of land surface soil moisture in eastern China during the past three decades (1979-2010), 121(10), 5177-5192.

Cheng, X., Wang, A. (2017). The potyvirus silencing suppressor protein VPg mediates degradation of SGS3 via ubiquitination and autophagy pathways, 91(1),

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Chipanshi, A.C., Zhang, Y., Qi, D., and Newlands, N.K. (2016). "Crop yield outlooks under extreme weather: lessons learnt from Canada.", - 40th NOAA Climate Diagnostics and Prediction Workshop Special Issue (March) NWS Science and Technology Infusion Climate Bulletin Supplement, National Oceanic and Atmospheric Administration, National Climatic Data Center, Asheville, NC, USA, pp. 154-158.

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Cliff, M.A., Law, J.R., Lücker, J., Scaman, C.H., Kermode, A.R. (2016). Descriptive and hedonic analyses of low-Phe food formulations containing corn (Zea mays) seedling roots: Toward development of a dietary supplement for individuals with phenylketonuria, 96(1), 140-149.

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Cui, H., Wang, A. (2017). An efficient viral vector for functional genomic studies of Prunus fruit trees and its induced resistance to Plum pox virus via silencing of a host factor gene, 15(3), 344-356.

Cuomo, C.A., Bakkeren, G., Khalil, H.B., Panwar, V., Joly, D., Linning, R., Sakthikumar, S., Song, X., Adiconis, X., Fan, L., Goldberg, J.M., Levin, J.Z., Young, S., Zeng, Q., Anikster, Y., Bruce, M., Wang, M., Yin, C., McCallum, B., Szabo, L.J., Hulbert, S., Chen, X., Fellers, J.P. (2017). Comparative analysis highlights variable genome content of wheat rusts and divergence of the mating loci, 7(2), 361-376.

Cuthbert, R.D., DePauw, R.M., Knox, R.E., Singh, A.K., McCaig, T.N., Fetch, T., McCallum, B. (2016). AAC Elie hard red spring wheat, 96(5), 919-927.

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Debnath, S.C. (2016). "Genetic Diversity and Erosion in Berries.", in Ahuja, M.R. and Jain, S.M. (eds.) - Genetic Diversity and Erosion in Plants, Case histories, Volume 2, Springer, pp. 75-129.

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Dergousoff, S.J., Lysyk, T.J., Kutz, S.J., Lejeune, M., Elkin, B.T. (2016). Human-Assisted Dispersal Results in the Northernmost Canadian Record of the American Dog Tick, Dermacentor variabilis (Ixodida: Ixodidae), 126(2), 132-137.

Desjardins, R.L., Worth, D.E., MacPherson, J.I., Bastian, M., and Srinivasan, R. (2016). "Flux measurements by the NRC Twin Otter atmospheric research aircraft: 1987–2011.", Advances in Science and Research, 13, pp. 43-49. doi : 10.5194/asr-13-43-2016

Desjardins, R.L., Worth, D.E., Verge, X., Maxime, D., VanderZaag, A.C., Dyer, J.A., and Arcand, Y. (2016). "Greenhouse Gas Emission Intensities of Agricultural Products.", in Clearwater, R.L., Martin, T. and Hoppe, T. (eds.) - Environmental sustainability of Canadian agriculture: Agri-environmental indicator report series -- Report #4, Agriculture and Agri-Food Canada, Chapter 18, pp. 211-222.

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Diane, A., Borthwick, F., Mapiye, C., Vahmani, P., David, R.C., Vine, D.F., Dugan, M.E.R., Proctor, S.D. (2016). Beef Fat Enriched with Polyunsaturated Fatty Acid Biohydrogenation Products Improves Insulin Sensitivity Without Altering Dyslipidemia in Insulin Resistant JCR:LA-cp Rats, 51(7), 821-831.

Ding, C., Rodas-González, A. R., López-Campos, Ó., Galbraith, J., Juárez, M., Larsen, I. L., ... & Aalhus, J. L. (2016). Effects of electrical stimulation on meat quality of bison striploin steaks and ground patties. Canadian Journal of Animal Science, 96(1), 79-89.

Ding, X., Li, Y., Hernández-Sebastià, C., Abbasi, P.A., Fisher, P., Celletti, M., and Wang, A.M. (2016). "First Report of Strawberry crinivirus 4 on Strawberry in Canada.", Plant Disease, pp. 1-3. doi : 10.1094/PDIS-01-16-0009-PDN

Diochon, A., Gillespie, A.W., Ellert, B.H., Janzen, H.H., Gregorich, E.G. (2016). Recovery and dynamics of decomposing plant residue in soil: An evaluation of three fractionation methods, 67(2), 196-205.

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Donly, B.C., Kaplanoglu, E., Theilmann, D.A., Baldwin, D., Sieminska, E., Hegedus, D.D., Erlandson, M.A. (2016). MacoNPV baculovirus midgut-specific gene expression during infection of the bertha armyworm, Mamestra configurata, 499 1-8.

Dring, C., Devlin, J.F., Boag, G., Sunohara, M.D., Fitzgibbon, J., Topp, E., Lapen, D.R. (2016). Incentives and disincentives identified by producers and drainage contractors/experts on the adoption of controlled tile drainage in eastern Ontario, Canada, 51(1), 1-16.

Drury, C.F., Yang, J., DeJong, R., Huffman, E.C., Reid, K., Yang, X.M., Bittman, S., and Desjardins, R.L. (2016). "Residual Soil Nitrogen Indicator.", in Clearwater, R.L., Martin, T. and Hoppe, T. (eds.) - Environmental sustainability of Canadian agriculture: Agri-environmental indicator report series -- Report #4, Agriculture and Agri-Food Canada, Chapter 11, pp. 115-120.

Drury, C.F., Yang, J., and De Jong, R. (2016). "Indicator of the Risk of Water Contamination by Nitrogen (IROWC-N).", in Clearwater, R.L., Martin, T., Hoppe, T. and Kalff, S. (eds.) - Environmental Sustainability of Canadian Agriculture: Agri-Environmental Indicators (Report #4), Agriculture and Agri-Food Canada.

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Drury, C.F., Yang, J.Y., and DeJong, R. (2016). "Water Contamination by Nitrogen.", in Clearwater, R.L., Martin, T. and Hoppe, T. (eds.) - Environmental sustainability of Canadian agriculture: Agri-environmental indicator report series -- Report #4, Agriculture and Agri-Food Canada, Chapter 11, pp. 121-130.

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Du, L., Song, J., Forney, C., Palmer, L.C., Fillmore, S., Zhang, Z. (2016). Proteome changes in banana fruit peel tissue in response to ethylene and high-temperature treatments, 3

Du, Y., Li, S., Zhang, Y., Rempel, C., Liu, Q. (2016). Treatments of protein for biopolymer production in view of processability and physical properties: A review, 133(17),

Dutta, B., Congreves, K.A., Smith, W.N., Grant, B.B., Rochette, P., Chantigny, M.H., Desjardins, R.L. (2016). Improving DNDC model to estimate ammonia loss from urea fertilizer application in temperate agroecosystems, 106(3), 275-292.

El Haddad, L., Roy, J.P., Khalil, G.E., St-Gelais, D., Champagne, C.P., Labrie, S., Moineau, S. (2016). Efficacy of two Staphylococcus aureus phage cocktails in cheese production, 217 7-13.

El-Sayed, A.M., Knight, A.L., Byers, J.A., Judd, G.J.R., Suckling, D.M. (2016). Caterpillar-induced plant volatiles attract conspecific adults in nature, 6

Elhiti, M., Wang, H., Austin, R.S., Chen, B., Brown, D., Wang, A. (2016). Generation of chemically induced mutations using in vitro propagated shoot tip tissues for genetic improvement of fruit trees, 124(2), 447-452.

Erickson, L., Kroetsch, T., Anzar, M. (2016). Relationship between sperm apoptosis and bull fertility: In vivo and in vitro studies, 28(9), 1369-1375.

Errampalli, D., Schneider, K.E. and Nelson, L. 2017. Effect of a biological agent and GRAS compounds on the control of apple postharvest diseases in long-term storages. Proceedings of the International Organization for the Biological Control (IOBC) 9th International conference on Integrated Fruit Production held from 4-8, 2016 in Thessaloniki, Greece (accepted for publication Feb 2017).

Esmaeili Taheri, A., Chatterton, S., Foroud, N.A., Gossen, B.D., McLaren, D.L. (2017). Identification and community dynamics of fungi associated with root, crown, and foot rot of field pea in western Canada, 147(3), 489-500.

Esmaeili Taheri, A., Hamel, C., Gan, Y. (2016). Cropping practices impact fungal endophytes and pathogens in durum wheat roots, 100 104-111.

Eves-van den Akker, S., Laetsch, D.R., Thorpe, P., Lilley, C.J., Danchin, E.G.J., Da Rocha, M., Rancurel, C., Holroyd, N.E., Cotton, J.A., Szitenberg, A., Grenier, E., Montarry, J., Mimee, B., Duceppe, M.O., Boyes, I., Marvin, J.M.C., Jones, L.M., Yusup, H.B., Lafond-Lapalme, J., Esquibet, M., Sabeh, M., Rott, M., Overmars, H., Finkers-Tomczak, A., Smant, G., Koutsovoulos, G., Blok, V., Mantelin, S., Cock, P.J.A., Phillips, W., Henrissat, B., Urwin, P.E., Blaxter, M., Jones, J.T. (2016). The genome of the yellow potato cyst nematode, Globodera rostochiensis, reveals insights into the basis of parasitism and virulence, 17(1),

FORNEY, C. F. 2016. Physiology and biochemistry of aroma and off-odors in fresh-cut products. Acta Horticulturae, 1141, 35-46.

FORNEY, C. F., JAMIESON, A. R., PENNELL, K. D. M., JORDAN, M. A. & FILLMORE, S. A. E. 2016. Response of raspberry cultivars and selections to controlled atmosphere storage. Acta Horticulturae, 1120, 57-64.

FORNEY, C. F., JORDAN, M. A. & CUE, K. R. 2016. Identification of aroma- Active compounds of whole and macerated 'Honeycrisp' and 'Ambrosia' apples. Acta Horticulturae, 1120, 137-142.

Fan, J., McConkey, B.G., Wang, H., and Janzen, H.H. (2016). "Root distribution by depth for temperate agricultural crops.", Field Crops Research, 189, pp. 68-74. doi : 10.1016/j.fcr.2016.02.013

Fan, L. 2016. Bacteriocins producing lactic acid bacteria: Isolation, optimization of growth condition for bacteriocins production and application in foods. Invited speaker at the American Chemical Society (ACS) Symposium “Natural and Bio-based Antimicrobials for Food Application”. Philadelphia, USA. August 21-25.

Fan, L.,* A. Martynenko, C. Doucette, T. Hughes and S. Fillmore. 2016. Microbial Quality and Shelf Life of Processed Blueberry Product. Poster presentation at the ISEKI Food Conference. July 5-8th. Vienna, Austria.

Fan, T., Bykova, N.V., Rampitsch, C., Xing, T. (2016). Identification and characterization of a serine protease from wheat leaves, 146(2), 293-304.

Farmer, C. (2016). "Altering prolactin concentrations in sows.", Domestic Animal Endocrinology, 56(Supplement), pp. 155-164. doi : 10.1016/j.domaniend.2015.11.005

Farnworth, E.R. and Champagne, C.P. (2016). "Production of probiotic cultures and their incorporation into foods.", in Watson, R.R. and Preedy, V.R. (eds.) - Bioactive foods in promoting health: probiotics and prebiotics, Elsevier Inc. Academic Press, Chapter 20, pp. 303-318.

Fentabil, M.M., Nichol, C.F., Jones, M.D., Neilsen, G.H., Neilsen, D., Hannam, K.D. (2016). Effect of drip irrigation frequency, nitrogen rate and mulching on nitrous oxide emissions in a semi-arid climate: An assessment across two years in an apple orchard, 235 242-252.

Fentabil, M.M., Nichol, C.F., Neilsen, G.H., Hannam, K.D., Neilsen, D., Forge, T.A., Jones, M.D. (2016). Effect of micro-irrigation type, N-source and mulching on nitrous oxide emissions in a semi-arid climate: An assessment across two years in a Merlot grape vineyard, 171 49-62.

Fernandez, M.R., Stevenson, C.F., Hodge, K., Dokken-Bouchard, F., Pearse, P.G., Waelchli, F., Brown, A., Peluola, C. (2016). Assessing effects of climatic change, region and agronomic practices on leaf spotting of bread and durum wheat in the western Canadian Prairies, from 2001 to 2012, 108(3), 1180-1195.

Fernandez-Triana, J.L., Whitfield, J.B., Alex Smith, M., Dapkey, T., Hallwachs, W., Janzen, D.H. (2016). Review of the world species of Exoryza (Hymenoptera, Braconidae, Microgastrinae), with description of five new species, 63(2), 195-210.

Fernando, D.M., Khan, I.U.H., Patidar, R., Lapen, D.R., Talbot, G., Topp, E., Kumar, A. (2016). Isolation and characterization of acinetobacter baumannii recovered from campylobacter selective medium, 7(NOV),

Floate, K.D., Godbout, J., Lau, M.K., Isabel, N., Whitham, T.G. (2016). Plant-herbivore interactions in a trispecific hybrid swarm of Populus: Assessing support for hypotheses of hybrid bridges, evolutionary novelty and genetic similarity, 209(2), 832-844.

Fock-Chow-Tho, D. E. Topp, E. Ibeagha-Awemu, and N. Bissonnette. Comparison of commercial DNA extraction and QPCR systems for a better sensitivity in detecting the causative paratuberculosis pathogen in dairy cow fecal samples. International Congress on Paratuberculosis, Nantes, France, June 19-24th.

Fock-Chow-Thow et al. 2017. Comparison of commercial DNA extraction kits and quantitative PCR systems for better sensitivity in detecting the causative agent of paratuberculosis in dairy cow fecal samples. Journal of Dairy Science 100(1):572-581.

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Foster LJ, Guarna MM, Hoover SE, Currie RW, Pernal SF (2016) Prospects for molecular markers to guide selective breeding of honey bees. XXV International Congress of Entomology 2016, 25-30 Sept 2016, Orlando, FL.

Fox, S.L., Kumar, S., Thomas, J.B., Humphreys, D.G., Mitchell Fetch, J., Green, D., Wise, I., Smith, M., Fetch, T., Gilbert, J., McCallum, B., Menzies, J. (2016). AAC cameron Canada western red spring wheat, 96(6), 1065-1072.

Francoz, D., Wellemans, V., Roy, J.-P., Lacasse, P., Ordonez-Iturriaga, A., Labelle, F., Dufour, S. (2016). Non-Antibiotic approaches at drying-off for treating and preventing intramammary infections: A protocol for a systematic review and meta-Analysis, 17(2), 169-175.

Frey, S.K., Hwang, H.T., Park, Y.J., Hussain, S.I., Gottschall, N., Edwards, M., Lapen, D.R. (2016). Dual permeability modeling of tile drain management influences on hydrologic and nutrient transport characteristics in macroporous soil, 535 392-406.

Fryza, S., Carlberg, J.G., Khakbazan, M., Robins, C.D., Block, H.C., Scott, S.L., Huang, J., Durunna, O.N. (2016). An economic analysis of resting versus nonresting perennial pastures during the critical acclimation period, 96(3), 364-375.

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Fu, Y.B., Peterson, G.W., Dong, Y. (2016). Increasing genome sampling and improving SNP genotyping for genotyping-by-sequencing with new combinations of restriction enzymes, 6(4), 845-856.

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Hamel, C., Plenchette, C. 2016. Implications of past, current and future agriculture practices for mycorrhiza-mediated nutrient flux. Chapter 10 in Mycorrhizal Mediation of Soil to be edited by Nancy Johnson, Catherine Gehring, and Jan Jansa. Elsevier, 526 pp.

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Hannam, K.D., Neilsen, G.H., Neilsen, D., Midwood, A.J., Millard, P., Zhang, Z., Thornton, B., Steinke, D. (2016). Amino acid composition of grape (Vitis vinifera L.) juice in response to applications of urea to the soil or foliage, 67(1), 47-55.

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He, W., Yang, J.Y., Zhou, W., Drury, C.F., Yang, X.M., Reynolds, W.D., Wang, H., He, P., Li, Z.T. (2016). Sensitivity analysis of crop yields, soil water contents and nitrogen leaching to precipitation, management practices and soil hydraulic properties in semi-arid and humid regions of Canada using the DSSAT model, 106(2), 201-215.

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Hiebert, C.W., Kolmer, J.A., McCartney, C.A., Briggs, J., Fetch, T., Bariana, H., Choulet, F., Rouse, M.N., Spielmeyer, W.S. (2016). Major gene for field stem rust resistance co-locates with resistance gene sr12 in 'thatcher' wheat, 11(6),

Hirooka, Y., Tanney, J.B., Nguyen, H.D.T., Seifert, K.A. (2016). Xerotolerant fungi in house dust: Taxonomy of Spiromastix, Pseudospiromastix and Sigleria gen. nov. in Spiromastigaceae (Onygenales, Eurotiomycetes), 108(1), 135-156.

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Hoppe, T., Haak, D., and Hewitt, J. (2016). "Farm Environmental Management.", in Clearwater, R.L., Martin, T. and Hoppe, T. (eds.) - Environmental sustainability of Canadian agriculture: Agri-environmental indicator report series -- Report #4, Agriculture and Agri-Food Canada, Chapter 5, pp. 38-52.

Horcada, A., Polvillo, O., Juárez, M., Avilés, C., Martínez, A.L., Peña, F. (2016). Influence of feeding system (concentrate and total mixed ration) on fatty acid profiles of beef from three lean cattle breeds, 49 110-116.

Hossain, M.M., Scott, I.M., Berruti, F., Briens, C. (2016). Application of 1D and 2D MFR reactor technology for the isolation of insecticidal and anti-microbial properties from pyrolysis bio-oils, 51(12), 860-867.

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Hu, G., Zhu, Y., Hernandez, M., Koutchma, T., Shao, S. (2016). An efficient method for the simultaneous determination of furan, 2-methylfuran and 2-pentylfuran in fruit juices by headspace solid phase microextraction and gas chromatography-flame ionisation detector, 192 9-14.

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Huang, X., Wang, J., Shang, J. (2016). An Adaptive Two-Component Model-Based Decomposition on Soil Moisture Estimation for C-Band RADARSAT-2 Imagery over Wheat Fields at Early Growing Stages, 13(3), 414-418.

Huang, X., Wang, J., Shang, J. (2016). An Integrated Surface Parameter Inversion Scheme over Agricultural Fields at Early Growing Stages by Means of C-Band Polarimetric RADARSAT-2 Imagery, 54(5), 2510-2528.

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Ibrahim, N.H.M., Thandapilly, S.J., Jia, Y., Netticadan, T., Aukema, H. (2016). Soy Protein Alleviates Hypertension and Fish Oil Improves Diastolic Heart Function in the Han:SPRD-Cy Rat Model of Cystic Kidney Disease, 51(5), 635-642.

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Ma, B.L., Biswas, D.K. (2016). Field-level comparison of nitrogen rates and application methods on maize yield, grain quality and nitrogen use efficiency in a humid environment, 39(5), 727-741.

Ma, B.L., H. Zhao, Z.M. Zheng, C. Caldwell, A. Mills, H. Earl, A. Vanasse, P. Scott, and D.L. Smith. 2016. Optimizing seeding dates and rates for canola production in the humid eastern Canadian agroecosystems. Agron. J. 108:1869-1879.

Ma, B.L., Herath, A.W. (2016). Timing and rates of nitrogen fertiliser application on seed yield, quality and nitrogen-use efficiency of canola, 67(2), 167-180.

Ma, B.L., Zheng, Z.M., Morrison, M.J., Gregorich, E.G. (2016). Nitrogen and phosphorus nutrition and stoichiometry in the response of maize to various N rates under different rotation systems, 104(1), 93-105.

Ma, Y.H., Wang, Q., Gong, J., Wu, X.Y. (2016). Formulation of Granules for Site-Specific Delivery of an Antimicrobial Essential Oil to the Animal Intestinal Tract, 105(3), 1124-1133.

Ma, Z., Marsolais, F., Bernards, M.A., Sumarah, M.W., Bykova, N.V., Igamberdiev, A.U. (2016). Glyoxylate cycle and metabolism of organic acids in the scutellum of barley seeds during germination, 248 37-44.

Ma, Z., Marsolais, F., Bykova, N.V., Igamberdiev, A.U. (2016). Nitric oxide and reactive oxygen species mediate metabolic changes in barley seed embryo during germination, 7(FEB2016),

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Marie-Claude Gagnon, Lawrence Kawchuk, D. Mathieu Tremblay, Odile Carisse, Giovanna Danies, William E. Fry, C. André Lévesque, and Guillaume J. Bilodeau. (2016). Identification of the Dominant Genotypes of Phytophthora infestans in Canada Using Real-Time PCR with ASO-PCR Assays. Plant Disease 100 (7): 1482-1491.

Marsal, F., Thevathasan, N.V., Guillot, S., Mann, J., Gordon, A.M., Thimmanagari, M., Deen, W., Silim, S., Soolanayakanahally, R., Sidders, D. (2016). Biomass yield assessment of five potential energy crops grown in southern Ontario, Canada, 90(5), 773-783.

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Wang, Z., Wang, Y., Kohalmi, S.E., Amyot, L., Hannoufa, A. (2016). SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 2 controls floral organ development and plant fertility by activating ASYMMETRIC LEAVES 2 in Arabidopsis thaliana, 92(6), 661-674.

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